CDS

Accession Number TCMCG057C47151
gbkey CDS
Protein Id XP_018455865.1
Location join(1004543..1006203,1006277..1006400,1006482..1006775,1006855..1007057,1007128..1007437)
Gene LOC108827017
GeneID 108827017
Organism Raphanus sativus

Protein

Length 863aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018600363.1
Definition PREDICTED: mechanosensitive ion channel protein 6-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category M
Description mechanosensitive channel of small conductance-like 6
KEGG_TC 1.A.23.4
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko02000        [VIEW IN KEGG]
KEGG_ko ko:K22048        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005215        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005774        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006811        [VIEW IN EMBL-EBI]
GO:0006820        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008381        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0015267        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0022803        [VIEW IN EMBL-EBI]
GO:0022836        [VIEW IN EMBL-EBI]
GO:0022857        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044437        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0055085        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCCGTCGATTCAACTGACCGGCGTGAAGTCATCCTCAAAATCAACGATCCTGAGCACAACGGAACCAACAACAACAATGGCGTCTCCGGCGGAGAGACGGCGGGGAAGATATGGAGAGACGGAAGTTACGATTTCTGGACCGACGGCCAGGGAAACCTCCACAAAGGCATTAACCCCGACGGCGAGAGATCCTCCGCCGCGGCGTCCGAGGAAGGTAAAGGAGACGATACCGAGCCGTTCGAGTTCCGGCGCGGCGAGGATCCTCCGACGAAGCTGATCGGTCAGTTCCTCCACAGACAGCAGGCCTCCGGCGAGATTTGCCTCGACATGGACCTGAGCATGGAGGAGCTCCAGTCCAAAGGCTTGACTCCCGTCTCCGAGTCTCCGGCGTCGTCCGCGAGAGCTAACAACAACAACAACCCCGACGCCGCCAGACGAGAAAGCCGCGACGGAGGAGAAGGCGTCGTGAAGTGCAGCGGAGCCGCCGCTGCTCCTCCGAGAAACTCGACGAGCTTGCTGAAGATGAGGACTAGGTCGCGACTCTCCGATCCGCCGACGCCGAAGCCACCGCTGCCTCCTCCTCAGTCGGGGAGGATACCTAAGTCTGGGCAGATGAAATCAGGTTTCTTCGGGAGAAGCCCTAGAACTCAAGGAGGAGGGGAGGAGGAGGAAGACGATCCGTTCGCTGAAGAGGATCTTCCCGAAGAGTATAGGAAGGATAAGCTCAGCTTATGGATCGTGTTGGAGTGGTTGAGTCTGATTCTGATCATAGCGGCTCTCGTCTGCACGCTTTCGATACGTTACTTGCGCGACAAGGTAATCTGGGAGCTGAATCTATGGAAGTGGGAGACGATGGTGTTGGTGTTGATATGCGGGAGGTTGGTGTCGAGCTGGATGGTGAAGATTGTTGTCTTCTTTGTTGAGAGAAACTTCCTTCTGAGGAAGAGGGTTTTGTATTTTGTCTATGGAGTGAGGAAGGCGGTGCAGAATTGTTTATGGTTAGGGCTTGTGTTGCTCGCGTGGCATTTCTTGTTTGATGAGAAAGTCGCTAAAGCGACGAAGACCAAGGCGCTTCGTAAAGTGACTAAGGTGATTGTTTGTTTGCTGGTTGGGTTCTTGTTGTGGCTTGTGAAGACGTTGCTGGTCAAAGTTCTCGCTTCCTCGTTTCATATGAGCACTTACTTCGATAGGATTCAGGAGTCTTTGTTTACTCAGTACGTGATTGAGACGTTGTCTGGTCCTCCTTTGATTGAGATTCAGAGGAACGAGGAGGAGGAAGAGAGGATCAGTGTTGAGGTTAAGAAGTTTCAGAACCCTGGCGGTGGTGGTGGTGTTGAGGTCGCGGCGTCGGGGACTCAGAAGAGTCCGGTTGAGAAAAGCCCGTTGCTGCTCTCTCGTGTTCTGTCTGATGGAGGAGGAGGAGGAGATAAGAAAGGGATTACGATTGATAGCTTGCATAAGATGAATACTAAGAATGTTTCCGCGTGGAAGATGAAGAGGCTGATGAATATAATCCGGCATGGATCGTTGACCACTCTAGATGAACAGCTACAAGATCCGAACTTGGAGGATGATAAGGGAAACCAAATCAGGAGTGAGTTTGAGGCAAAGCTCGCTGCAAGAAAGATCTTTCACAATGTAGCCAAGCCTGGATCAAAGTTCATCTACCTGAAGGACATATCACGGTTTCTGCCAGAAGACGAAGCTTTGAAGACTTTAAGTCTCTTTGAAGGAGCAACTGAGACAAACCGAATCAGCAAATCATCTCTCAAAAACTGGGTGGTGAATGCTTTCAGAGAGAGAAGAGCGCTTGCGTTGACCCTAAACGACACAAAAACAGCAGTGAACAGGCTTCACAAGATGGTGAACATCGTAGTTGGGATCATCATAATCATCATCTGGCTTATCATACTTGGAATCACTTCCACCAAATTCCTCGTGGTCATGAGCTCGCAAATCGTGGTTGTCGCATTCATATTTGGAAACATGTGCAAGATAGTGTTCGAATCTATCATCTACTTGTTTGTGATACACCCCTTTGATGTAGGCGATAGGTGTGAGATCGACGGCATCCAGATGGTTGTGGAAGAGATGAACATACTGACAACTGTGTTCTTGAGGTTTGATAACCAGAAAGTTGTGTACCCGAACAGTCTCCTCTGGACTAAATCTATTGGCAACTACTACCGTAGTCCTGATATGGGAGATGGAATCGAATTCTCCATCCACATTACTACTCCAGCTGAGAAGATCATGCTCATCAAGCAGAGAATCACAAGTTACATTGAGGGGAAGAAGGATCACTGGTACCCAGCGCCAATGATAGTATTCAAAGACATGGAATCACTAAACAGTGTGAGGATTGCGGTATGGCCAACGCATAGAATGAACCATCAAGACATGGGAGAGAAATGGGCTCGAAGATCTCAACTTGTTGAAGAGATAGCCAAGATTTGCAGAGAGCTTGACATTGAGTATAGGTTGTATCCTCTCGACATCAATGTCAGAACTTTGCCCACTCCTACCGGTTTGCCTGTCTCCGACCGTCTTCCACCTCACTGGACTGCTCCTGGTTCCAGCAGCAAATGA
Protein:  
MAVDSTDRREVILKINDPEHNGTNNNNGVSGGETAGKIWRDGSYDFWTDGQGNLHKGINPDGERSSAAASEEGKGDDTEPFEFRRGEDPPTKLIGQFLHRQQASGEICLDMDLSMEELQSKGLTPVSESPASSARANNNNNPDAARRESRDGGEGVVKCSGAAAAPPRNSTSLLKMRTRSRLSDPPTPKPPLPPPQSGRIPKSGQMKSGFFGRSPRTQGGGEEEEDDPFAEEDLPEEYRKDKLSLWIVLEWLSLILIIAALVCTLSIRYLRDKVIWELNLWKWETMVLVLICGRLVSSWMVKIVVFFVERNFLLRKRVLYFVYGVRKAVQNCLWLGLVLLAWHFLFDEKVAKATKTKALRKVTKVIVCLLVGFLLWLVKTLLVKVLASSFHMSTYFDRIQESLFTQYVIETLSGPPLIEIQRNEEEEERISVEVKKFQNPGGGGGVEVAASGTQKSPVEKSPLLLSRVLSDGGGGGDKKGITIDSLHKMNTKNVSAWKMKRLMNIIRHGSLTTLDEQLQDPNLEDDKGNQIRSEFEAKLAARKIFHNVAKPGSKFIYLKDISRFLPEDEALKTLSLFEGATETNRISKSSLKNWVVNAFRERRALALTLNDTKTAVNRLHKMVNIVVGIIIIIIWLIILGITSTKFLVVMSSQIVVVAFIFGNMCKIVFESIIYLFVIHPFDVGDRCEIDGIQMVVEEMNILTTVFLRFDNQKVVYPNSLLWTKSIGNYYRSPDMGDGIEFSIHITTPAEKIMLIKQRITSYIEGKKDHWYPAPMIVFKDMESLNSVRIAVWPTHRMNHQDMGEKWARRSQLVEEIAKICRELDIEYRLYPLDINVRTLPTPTGLPVSDRLPPHWTAPGSSSK